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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942586.1_cds_XP_016486013.1_76888
CDS Infomation

[gene=LOC107806382] [db_xref=GeneID:107806382] [protein=pectin acetylesterase 8-like] [protein_id=XP_016486013.1] [location=complement(join(39592..39729,39867..40012,40751..40856,41438..41515,41591..41644,41748..41808,41915..42039,42135..42221,42333..42412,42498..42627,43149..43231,43708..43828))] [gbkey=CDS]
Sequence

ATGGTTAAAAGGGCAATGCAACAATGGCTACGTGTAATAATTACTTTGCTTATTCTTTTA
ATAACTGAAGGACACCCTGTTGATATTACTTATCTTCAGAGTGCTGTTGCAAAAGGAGCT
GTATGTTTGGATGGGAGTCCACCAGCATACCATTTTGATAAAGGATTTGGAGCAGGTGTT
AACAATTGGTTTATCCAACTTGAGGGAGGAGCATGGTGCAACAATGCCACGACTTGCCTT
TCCCGTACAAAAACACGATTAGGATCATCTAAACTTATGGTAAAGACAGTGTCTTTTTCA
GGGATTTTGAGCAACAAGGCTAAGTTTAACCCAGACTTTTACAATTGGAACAGAATTAGA
ATCAGATATTGTGATGGATCATCCTTTACTGGTGACGTTGAAGCAGTCGATCCGAGAACA
AAAGTATACTACAGAGGAGCCAGGATTTTTTCAGCTGTTATGGAGGATTTCTTAGCAAAA
GGAATGAAGAGCGCTCAGAATGCTATTCTTGCTGGATGTTCAGCTGGTAGTTTGGCTGCA
ATTCTACATTGTGACAGATTTAAAGGCCTCCTTCCACCGGGCGCTAAAGTAAAATGTCTT
TCAGATGCTGGTTTCTTTATCAATGCGAAGACTATTTCTGGTGCGTCTCATATTGAACAG
TTCTACAGCGATGTTGTTAACACACATGGTTCTGCTAAGAATTTGCCTCAATCATGTACC
TCAAGACTAAAACCGGGATTGTGTTTTTTCCCACAAAATGTCGCGCAACAAATCAAGACA
CCTCTTTTCCTGGTAAATGCAGCCTATGATTCCTGGCAGATAAAGAACATTTTAGCCCCT
GGTGTTGCTGATCCTCGTGGAACCTGGCGCAACTGCAAGCTTGACATATTGAAATGCTCG
TCTGCTCAGCTCGAAACCATGCAAGGTTATAGGAACGAGTTCTTAAAAGCATTAAACGGG
CTTGGACCATCCTCAACAAGAGGGTATTACATCAATTCGTGTTATGCACATTGTCAAACC
GGAACACAGGAGACATGGCTAAGGGATGACTCTCCGAGATTAGCTAGCACGACAATTGCC
AAAGCAGTTGGAGACTGGTTTTACGACAGAAATCGATTCCAAGAGATTGACTGTCCTTAC
CCTTGTGACAAAACCTGCAAAAATCGGAATTTTGAATCGGACGTTCAGCCGGTCGATATG
GATTTATAG

Peptide Sequence

PEP ID

XP_016486013.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MVKRAMQQWLRVIITLLILLITEGHPVDITYLQSAVAKGAVCLDGSPPAYHFDKGFGAGV
NNWFIQLEGGAWCNNATTCLSRTKTRLGSSKLMVKTVSFSGILSNKAKFNPDFYNWNRIR
IRYCDGSSFTGDVEAVDPRTKVYYRGARIFSAVMEDFLAKGMKSAQNAILAGCSAGSLAA
ILHCDRFKGLLPPGAKVKCLSDAGFFINAKTISGASHIEQFYSDVVNTHGSAKNLPQSCT
SRLKPGLCFFPQNVAQQIKTPLFLVNAAYDSWQIKNILAPGVADPRGTWRNCKLDILKCS
SAQLETMQGYRNEFLKALNGLGPSSTRGYYINSCYAHCQTGTQETWLRDDSPRLASTTIA
KAVGDWFYDRNRFQEIDCPYPCDKTCKNRNFESDVQPVDMDL

Transcript Sequence

Gene sequence data has not been registered.